C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 5-hydroxytryptamine (serotonin) receptor 7 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000538670 HTR7P1-001 ENSG00000183935 9606 + 12:13001499-13002834 transcribed_processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonLiverOvaryPlacentaENST00000538670
Transcript ID Breast Colon Liver Ovary Placenta
ENST00000538670 0.294±0.00 0.299±0.00 1.479±0.00 0.366±0.00 0.812±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000DR CIL_0000DR_0001 CGP 12:12974864-13142521

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000164639 Htr7-001 protein_coding Mus_musculus 0 1352
ENSMUST00000166074 Htr7-005 protein_coding Mus_musculus 0 1330
ENSMUST00000099505 Htr7-006 protein_coding Mus_musculus 0 1306
ENSMUST00000165215 Htr7-002 nonsense_mediated_decay Mus_musculus 0 769
ENSMUST00000170360 Htr7-003 nonsense_mediated_decay Mus_musculus 0 763
ENSMUST00000164781 Htr7-004 nonsense_mediated_decay Mus_musculus 0 747

Loading