| Transcript ID | Breast | Colon | Kidney | Ovary |
|---|---|---|---|---|
| ENSMUST00000164781 | 0.190±0.00 | 0.052±0.00 | 0.025±0.02 | 0.138±0.09 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | 5-hydroxytryptamine (serotonin) receptor 7 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000164781  |
Htr7-004 |
ENSMUSG00000024798 |
10090 | - |
19:35958734-36057360  |
nonsense_mediated_decay |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0005PF | CIL_0005PF_0003 | CGP | 19:34922358-36057507 |
| CIL_0008BY | CIL_0008BY_0002 | VISTA | 19:35829039-36429586 |
| CIL_0005UK | CIL_0005UK_0002 | CGP | 19:35958734-36104772 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004993 | IEA | serotonin receptor activity |
| GO:0006939 | IEA | smooth muscle contraction |
| GO:0007210 | IEA | serotonin receptor signaling pathway |
| GO:0007268 | IEA | synaptic transmission |
| GO:0007623 | IEA | circadian rhythm |
| GO:0016021 | IEA | integral component of membrane |
| GO:0042310 | IEA | vasoconstriction |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000277874
|
HTR7-002 | protein_coding | Homo_sapiens | 0 | 1646 |
|
ENST00000336152
|
HTR7-001 | protein_coding | Homo_sapiens | 0 | 996 |
|
ENST00000371719
|
HTR7-003 | protein_coding | Homo_sapiens | 0 | 1679 |
|
ENST00000538670
|
HTR7P1-001 | transcribed_processed_pseudogene | Homo_sapiens | 0 | 747 |
|
ENST00000624664
|
HTR7P1-002 | TEC | Homo_sapiens | 0 | 1031 |
