C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: poly(A)-specific ribonuclease
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000539279 PARN-004 ENSG00000140694 9606 - 16:14436668-14630238 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainKidneyENST00000539279
Transcript ID Adipose Brain Kidney
ENST00000539279 1.820±0.00 3.674±0.00 1.597±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007DW CIL_0007DW_0001 CGP 16:14071321-14632728
CIL_0007DV CIL_0007DV_0001 CGP 16:14435701-14669236

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0004535 IEA poly(A)-specific ribonuclease activity
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006402 IEA mRNA catabolic process
GO:0046872 IEA metal ion binding
GO:0090503 IEA RNA phosphodiester bond hydrolysis, exonucleolytic

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058884 Parn-201 protein_coding Mus_musculus 0 1168

Loading