C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 260
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000539559 TMEM260-006 ENSG00000070269 9606 + 14:56579841-56648094 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonKidneyLiverLungOvaryENST00000539559
Transcript ID Bladder Breast Colon Kidney Liver Lung Ovary
ENST00000539559 0.814±0.00 2.236±0.00 1.008±0.00 0.284±0.00 0.811±0.00 2.110±0.00 2.627±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000601 CIL_000601_0002 CGP 14:56117814-56650606
CIL_000602 CIL_000602_0002 CGP 14:56488354-56810479

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111735 Tmem260-001 protein_coding Mus_musculus 0 1029
ENSMUST00000124720 Tmem260-005 protein_coding Mus_musculus 0 1029
ENSMUST00000156480 Tmem260-003 retained_intron Mus_musculus 0 883
ENSMUST00000133744 Tmem260-002 retained_intron Mus_musculus 0 883
ENSMUST00000153765 Tmem260-004 nonsense_mediated_decay Mus_musculus 0 540

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