C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | sarcospan | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000540266  |
SSPN-009 |
ENSG00000123096 |
9606 | + |
12:26134967-26231146  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0004X8 | CIL_0004X8_0001 | CGP | 12:25959029-26125127 |
| CIL_0004X9 | CIL_0004X9_0001 | CGP | 12:26120026-26299290 |
| CIL_0004XE | CIL_0004XE_0001 | CGP | 12:26121991-26833198 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005887 | TAS | integral component of plasma membrane |
| GO:0006936 | TAS | muscle contraction |
| GO:0007155 | TAS | cell adhesion |
| GO:0016010 | TAS | dystrophin-associated glycoprotein complex |
| GO:0016021 | IEA | integral component of membrane |
| GO:0030054 | IEA | cell junction |
| GO:0030133 | IDA | transport vesicle |
| GO:0045211 | IEA | postsynaptic membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000111702
|
Sspn-002 | protein_coding | Mus_musculus | 0 | 459 |
|
ENSMUST00000111701
|
Sspn-003 | protein_coding | Mus_musculus | 0 | 457 |
|
ENSMUST00000032383
|
Sspn-001 | protein_coding | Mus_musculus | 0 | 457 |
