C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: sarcospan
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111701 Sspn-003 ENSMUSG00000030255 10090 + 6:145953429-145965223 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000111701
Transcript ID Testis
ENSMUST00000111701 0.196±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004X9 CIL_0004X9_0002 CGP 6:145858243-145965223
CIL_0004XE CIL_0004XE_0002 CGP 6:145931641-146502223

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane
GO:0042383 IDA sarcolemma

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000242729 SSPN-001 protein_coding Homo_sapiens 0 457
ENST00000422622 SSPN-003 protein_coding Homo_sapiens 0 457
ENST00000538142 SSPN-007 protein_coding Homo_sapiens 0 429
ENST00000540266 SSPN-009 protein_coding Homo_sapiens 0 457

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