C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription elongation factor B (SIII), polypeptide 1 pseudogene 31
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000540463 TCEB1P31-001 ENSG00000256021 9606 - 12:21447545-21448314 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLungMuscleOvaryTestisENST00000540463
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Testis
ENST00000540463 0.026±0.00 0.383±0.00 0.081±0.00 0.026±0.00 0.462±0.00 0.024±0.00 0.186±0.00 0.523±0.00 0.023±0.00 0.456±0.36 0.048±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006XQ CIL_0006XQ_0002 CGP 12:21354959-21471252
CIL_0005PY CIL_0005PY_0001 CGP 12:21437615-21501669

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115352 Tceb1-001 protein_coding Mus_musculus 0 510
ENSMUST00000185771 Tceb1-006 protein_coding Mus_musculus 0 508
ENSMUST00000186948 Tceb1-004 protein_coding Mus_musculus 0 507
ENSMUST00000188641 Tceb1-002 protein_coding Mus_musculus 0 507
ENSMUST00000187910 Tceb1-005 protein_coding Mus_musculus 0 475
ENSMUST00000185393 Tceb1-009 protein_coding Mus_musculus 0 383
ENSMUST00000119040 Gm14517-001 processed_pseudogene Mus_musculus 0 291
ENSMUST00000117761 Gm11386-001 processed_pseudogene Mus_musculus 0 268
ENSMUST00000186701 Tceb1-007 protein_coding Mus_musculus 0 220

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