C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | ceramide synthase 5 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000542320  |
CERS5-026 |
ENSG00000139624 |
9606 | - |
12:50135519-50167300  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008PE | CIL_0008PE_0001 | VISTA | 12:49905565-50507504 |
| CIL_0008CC | CIL_0008CC_0001 | VISTA | 12:49906068-50507455 |
| CIL_00033M | CIL_00033M_0002 | CGP | 12:50111979-50167533 |
| CIL_0000LJ | CIL_0000LJ_0001 | CGP | 12:50129306-50283546 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003677 | IEA | DNA binding |
| GO:0005634 | IEA | nucleus |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000023762
|
Cers5-001 | protein_coding | Mus_musculus | 0 | 448 |
|
ENSMUST00000176248
|
Cers5-007 | nonsense_mediated_decay | Mus_musculus | 0 | 448 |
|
ENSMUST00000109035
|
Cers5-002 | protein_coding | Mus_musculus | 0 | 448 |
|
ENSMUST00000175876
|
Cers5-003 | protein_coding | Mus_musculus | 0 | 257 |
|
ENSMUST00000176627
|
Cers5-004 | protein_coding | Mus_musculus | 0 | 255 |
