C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SLIT-ROBO Rho GTPase activating protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000542841 SRGAP1-004 ENSG00000196935 9606 + 12:64127637-64142566 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaTestisENST00000542841
Transcript ID Placenta Testis
ENST00000542841 2.353±0.00 9.657±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002KR CIL_0002KR_0002 CGP 12:63844293-64222296

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000081688 Srgap1-201 protein_coding Mus_musculus 0 697
ENSMUST00000161996 Srgap1-003 processed_transcript Mus_musculus 0 697
ENSMUST00000020322 Srgap1-001 protein_coding Mus_musculus 0 697
ENSDART00000088908 srgap1-201 protein_coding Danio_rerio 0 193
ENSDART00000140403 srgap1-001 protein_coding Danio_rerio 0 193

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