C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: trophoblast glycoprotein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000543496 TPBG-202 ENSG00000146242 9606 + 6:82364244-82367417 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000543496
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000543496 3.961±0.00 2.764±0.00 1.171±0.13 2.203±0.62 2.766±2.24 1.336±0.00 2.787±2.48 1.752±1.48 3.794±0.00 0.587±0.29 1.917±0.85 8.408±5.28 2.433±1.99

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006GF CIL_0006GF_0001 CGP 6:82169983-82370828
CIL_0006GG CIL_0006GG_0001 CGP 6:82363206-83065841

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005887 TAS integral component of plasma membrane
GO:0007155 NAS cell adhesion
GO:0009986 IDA cell surface

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000098500 Tpbg-001 protein_coding Mus_musculus 0 1312
ENSMUST00000006559 Tpbg-002 protein_coding Mus_musculus 0 1312

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