C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: non-SMC condensin II complex, subunit H2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000074552 Ncaph2-001 ENSMUSG00000008690 10090 + 15:89355736-89372826 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000074552
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000074552 11.665±5.13 12.320±0.50 8.205±0.00 12.366±0.00 7.543±3.80 13.069±0.62 8.536±2.42 10.907±1.75 14.868±6.52 13.524±1.93 4.024±1.31 15.035±4.72 8.838±0.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00026C CIL_00026C_0002 CGP 15:89351004-89372826
CIL_0000V1 CIL_0000V1_0003 CGP 15:89355719-89373818

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0030261 IEA chromosome condensation
GO:0033077 IMP T cell differentiation in thymus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000252785 SCO2-002 protein_coding Homo_sapiens 0 604
ENST00000299821 NCAPH2-009 protein_coding Homo_sapiens 0 1367
ENST00000395693 SCO2-001 protein_coding Homo_sapiens 0 604
ENST00000395698 NCAPH2-003 protein_coding Homo_sapiens 0 636
ENST00000395701 NCAPH2-006 protein_coding Homo_sapiens 0 1199
ENST00000418794 NCAPH2-004 nonsense_mediated_decay Homo_sapiens 0 383
ENST00000420993 NCAPH2-001 protein_coding Homo_sapiens 0 1382
ENST00000518394 NCAPH2-013 nonsense_mediated_decay Homo_sapiens 0 523
ENST00000523045 NCAPH2-012 protein_coding Homo_sapiens 0 329
ENST00000535425 SCO2-201 protein_coding Homo_sapiens 0 604
ENST00000543927 SCO2-202 protein_coding Homo_sapiens 0 604

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