C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: Hermansky-Pudlak syndrome 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000544218 HPS5-009 ENSG00000110756 9606 - 11:18285373-18296045 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000544218
Transcript ID Muscle
ENST00000544218 1.150±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041D CIL_00041D_0002 CGP 11:18278668-18367044

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000145776 Hps5-004 retained_intron Mus_musculus 0 198
ENSMUST00000107653 Hps5-003 protein_coding Mus_musculus 0 198
ENSMUST00000014562 Hps5-001 protein_coding Mus_musculus 0 198
ENSMUST00000107654 Hps5-002 protein_coding Mus_musculus 0 198
ENSMUST00000142663 Hps5-005 nonsense_mediated_decay Mus_musculus 0 198
ENSMUST00000153789 Hps5-007 protein_coding Mus_musculus 4.00001e-41 172

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