C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 6 (neurotransmitter transporter), member 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000545058 SLC6A12-013 ENSG00000111181 9606 - 12:190086-199058 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000545058
Transcript ID Adipose Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000545058 0.067±0.00 0.132±0.00 0.124±0.00 0.102±0.00 18.071±0.00 5.445±0.00 0.110±0.00 0.052±0.00 0.133±0.00 0.083±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00083Y CIL_00083Y_0001 VISTA 12:106900-709490

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000163771 Slc6a12-009 nonsense_mediated_decay Mus_musculus 0 953
ENSMUST00000171874 Slc6a12-004 retained_intron Mus_musculus 0 501
ENSMUST00000171008 Slc6a12-007 protein_coding Mus_musculus 0 496
ENSMUST00000032200 Slc6a12-002 protein_coding Mus_musculus 0 496
ENSMUST00000166457 Slc6a12-001 protein_coding Mus_musculus 0 496
ENSMUST00000165456 Slc6a12-008 nonsense_mediated_decay Mus_musculus 0 468
ENSMUST00000170339 Slc6a12-005 retained_intron Mus_musculus 0 431
ENSMUST00000142021 Slc6a13-003 processed_transcript Mus_musculus 0 272
ENSMUST00000064580 Slc6a13-001 protein_coding Mus_musculus 0 272
ENSMUST00000170582 Slc6a12-006 retained_intron Mus_musculus 0 259

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