C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif protein 19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000545145 RBM19-003 ENSG00000122965 9606 - 12:113816742-113966306 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENST00000545145
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000545145 1.287±0.00 4.018±0.00 1.322±0.59 2.445±0.00 0.661±0.49 2.026±0.00 0.562±0.04 1.837±0.00 2.171±0.93 0.579±0.00 1.582±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000842 CIL_000842_0001 VISTA 12:113363390-113966000
CIL_000875 CIL_000875_0001 VISTA 12:113632311-114233611
CIL_0008LK CIL_0008LK_0001 VISTA 12:113632321-114234251

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0005634 IDA nucleus
GO:0005654 ISS nucleoplasm
GO:0005694 IEA chromosome
GO:0005730 ISS nucleolus
GO:0005737 ISS cytoplasm
GO:0007275 IEA multicellular organismal development
GO:0016020 IDA membrane
GO:0040019 ISS positive regulation of embryonic development
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031590 Rbm19-201 protein_coding Mus_musculus 0 2313

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