C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PTPRF interacting protein, binding protein 1 (liprin beta 1)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000545381 PPFIBP1-004 ENSG00000110841 9606 + 12:27524142-27658848 non_stop_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastHeartKidneyLiverOvaryENST00000545381
Transcript ID Bladder Breast Heart Kidney Liver Ovary
ENST00000545381 6.655±0.00 6.036±0.00 12.768±0.00 4.674±0.00 10.626±0.00 12.856±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056H CIL_00056H_0001 CGP 12:27466810-27695564

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0007160 IEA cell-matrix adhesion
GO:0007165 IEA signal transduction
GO:0008907 IEA integrase activity
GO:0015074 IEA DNA integration
GO:0048786 IEA presynaptic active zone

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111623 Ppfibp1-002 protein_coding Mus_musculus 0 1083
ENSMUST00000016631 Ppfibp1-001 protein_coding Mus_musculus 0 1035

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