C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: collagen, type IV, alpha 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000545689 COL4A6-203 ENSG00000197565 9606 - X:108155891-108438430 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainHeartMuscleENST00000545689
Transcript ID Adipose Adrenal Brain Heart Muscle
ENST00000545689 0.213±0.00 0.619±0.00 0.074±0.00 0.350±0.00 0.192±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006JL CIL_0006JL_0001 CGP X:108091668-108439497
CIL_000172 CIL_000172_0002 CGP X:108155607-108697545

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005201 IEA extracellular matrix structural constituent
GO:0005581 IEA collagen trimer

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000101205 Col4a6-001 protein_coding Mus_musculus 0 3310

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