C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: high mobility group AT-hook 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000545998 HMGA2-009 ENSG00000149948 9606 + 12:65824811-65829013 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderENST00000545998
Transcript ID Bladder
ENST00000545998 0.176±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088X CIL_00088X_0001 VISTA 12:65441147-66043028

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000159699 Hmga2-002 protein_coding Mus_musculus 0 466
ENSMUST00000072777 Hmga2-001 protein_coding Mus_musculus 0 466
ENSMUST00000159310 Hmga2-003 retained_intron Mus_musculus 0 442

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