C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0001M7_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000075856-ENSG00000136003 | CGP | 9606 | 12:108522580-108569384  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000075856  (SART3)squamous cell carcinoma antigen recognized by T cells 3 |
ENST00000228284 (SART3-001)
|
108522580-108561389 | protein_coding | |
|
ENST00000431469 (SART3-005)
|
108523412-108561159 | protein_coding | ||
|
ENST00000546611 (SART3-017)
|
108560217-108561400 | protein_coding | ||
|
ENST00000546728 (SART3-003)
|
108522708-108561161 | nonsense_mediated_decay | ||
|
ENST00000546808 (SART3-012)
|
108531204-108535573 | retained_intron | ||
|
ENST00000546815 (SART3-006)
|
108526210-108561159 | protein_coding | ||
|
ENST00000547397 (SART3-011)
|
108523869-108526185 | protein_coding | ||
|
ENST00000547528 (SART3-004)
|
108530210-108561160 | nonsense_mediated_decay | ||
|
ENST00000548077 (SART3-010)
|
108531224-108537695 | retained_intron | ||
|
ENST00000548119 (SART3-009)
|
108537106-108538132 | retained_intron | ||
|
ENST00000548582 (SART3-013)
|
108530210-108532617 | retained_intron | ||
|
ENST00000550322 (SART3-008)
|
108543069-108549328 | protein_coding | ||
|
ENST00000550619 (SART3-015)
|
108545139-108554198 | protein_coding | ||
|
ENST00000551416 (SART3-014)
|
108543112-108544944 | retained_intron | ||
|
ENST00000552221 (SART3-007)
|
108545289-108561168 | processed_transcript | ||
|
ENST00000619503 (SART3-016)
|
108530223-108531968 | retained_intron | ||
|
ENSG00000136003 (ISCU) iron-sulfur cluster assembly enzyme |
ENST00000311893 (ISCU-001)
|
108562601-108569384 | protein_coding | |
|
ENST00000392807 (ISCU-006)
|
108562606-108569368 | protein_coding | ||
|
ENST00000431221 (ISCU-004)
|
108562601-108569092 | protein_coding | ||
|
ENST00000535405 (ISCU-008)
|
108562617-108567444 | retained_intron | ||
|
ENST00000535729 (ISCU-003)
|
108562601-108568547 | protein_coding | ||
|
ENST00000538193 (ISCU-011)
|
108567858-108569094 | retained_intron | ||
|
ENST00000539580 (ISCU-005)
|
108562606-108569368 | nonsense_mediated_decay | ||
|
ENST00000539593 (ISCU-007)
|
108562610-108567908 | protein_coding | ||
|
ENST00000540154 (ISCU-010)
|
108567734-108569094 | processed_transcript | ||
|
ENST00000544493 (ISCU-009)
|
108564999-108567299 | retained_intron | ||
|
ENST00000545932 (ISCU-002)
|
108562582-108569341 | retained_intron | ||
|
ENST00000547005 (ISCU-012)
|
108562601-108569099 | protein_coding | ||
|
ENST00000552072 (ISCU-013)
|
108562601-108567566 | retained_intron | ||
| CIL_0001M7_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000018974-ENSMUSG00000025825 | CGP | 10090 | 5:113742446-113778288 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000018974 (Sart3) squamous cell carcinoma antigen recognized by T cells 3 |
ENSMUST00000019118 (Sart3-201)
|
113742446-113771649 | protein_coding | |
|
ENSMUSG00000025825 (Iscu) IscU iron-sulfur cluster scaffold homolog (E. coli) |
ENSMUST00000026937 (Iscu-001)
|
113772748-113778288 | protein_coding | |
|
ENSMUST00000112311 (Iscu-002)
|
113772803-113777798 | protein_coding | ||
|
ENSMUST00000112312 (Iscu-003)
|
113772803-113778273 | protein_coding | ||
|
ENSMUST00000123616 (Iscu-004)
|
113772818-113777039 | nonsense_mediated_decay | ||
|
ENSMUST00000134881 (Iscu-005)
|
113773025-113777945 | nonsense_mediated_decay | ||
|
ENSMUST00000145592 (Iscu-007)
|
113773847-113777841 | protein_coding | ||
|
ENSMUST00000145778 (Iscu-006)
|
113773005-113778014 | protein_coding | ||
Expression Patterns
|
