C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000548169 ATP2A2-006 ENSG00000174437 9606 + 12:110292049-110346621 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonLungOvaryPlacentaTestisENST00000548169
Transcript ID Adrenal Breast Colon Lung Ovary Placenta Testis
ENST00000548169 7.930±0.00 5.474±0.00 5.719±0.00 17.711±0.00 27.350±0.00 12.708±0.00 42.060±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001QG CIL_0001QG_0002 CGP 12:110124335-110351093
CIL_0001QF CIL_0001QF_0002 CGP 12:110280756-110403730

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005388 IEA calcium-transporting ATPase activity
GO:0006816 IEA calcium ion transport
GO:0016021 IEA integral component of membrane
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031423 Atp2a2-201 protein_coding Mus_musculus 0 3546
ENSMUST00000177974 Atp2a2-202 protein_coding Mus_musculus 0 3110
ENSMUST00000179939 Atp2a2-203 protein_coding Mus_musculus 0 3110
ENSDART00000047201 atp2a2b-001 protein_coding Danio_rerio 0 1539

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