C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, Ca++ transporting, cardiac muscle, slow twitch 2b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000047201 atp2a2b-001 ENSDARG00000005122 7955 + 21:15563063-15618633 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyLiverMuscleENSDART00000047201
Transcript ID Heart Kidney Liver Muscle
ENSDART00000047201 6.522±3.47 11.838±2.09 20.967±0.00 12.006±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005388 IEA calcium-transporting ATPase activity
GO:0005524 IEA ATP binding
GO:0006812 IEA cation transport
GO:0006816 IEA calcium ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0016787 IEA hydrolase activity
GO:0019829 IEA cation-transporting ATPase activity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032974 Atp2a1-001 protein_coding Mus_musculus 0 1616
ENST00000308664 ATP2A2-001 protein_coding Homo_sapiens 0 1803
ENST00000309890 ATP2A3-201 protein_coding Homo_sapiens 0 1216
ENST00000352011 ATP2A3-015 protein_coding Homo_sapiens 0 1216
ENST00000359983 ATP2A3-005 protein_coding Homo_sapiens 0 1216
ENST00000377685 ATP2A2-002 nonsense_mediated_decay Homo_sapiens 0 1827
ENST00000397035 ATP2A3-004 protein_coding Homo_sapiens 0 1216
ENST00000397041 ATP2A3-001 protein_coding Homo_sapiens 0 1216
ENST00000397043 ATP2A3-002 protein_coding Homo_sapiens 0 1216
ENST00000539276 ATP2A2-003 protein_coding Homo_sapiens 0 1829
ENST00000547792 ATP2A2-010 retained_intron Homo_sapiens 0 239
ENST00000548169 ATP2A2-006 protein_coding Homo_sapiens 0 1539

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