C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: serine/arginine-rich splicing factor 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142318 Srsf9-003 ENSMUSG00000029538 10090 + 5:115328640-115332650 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastMuscleOvaryPlacentaTestisENSMUST00000142318
Transcript ID Brain Breast Muscle Ovary Placenta Testis
ENSMUST00000142318 64.866±0.00 3.319±0.00 3.256±0.00 58.957±0.00 39.488±23.06 35.148±21.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZA CIL_0007ZA_0002 VISTA 5:114966986-115567561
CIL_0009CQ CIL_0009CQ_0002 VISTA 5:115188390-115791906

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229390 SRSF9-001 protein_coding Homo_sapiens 0 584
ENST00000399149 SRSF9P1-001 processed_pseudogene Homo_sapiens 0 279
ENST00000546942 SRSF9-002 retained_intron Homo_sapiens 0 224
ENST00000548326 SRSF9-004 retained_intron Homo_sapiens 2e-26 124
ENST00000548792 SRSF9-003 retained_intron Homo_sapiens 0 366
ENST00000550458 SRSF9-005 protein_coding Homo_sapiens 0 198
ENST00000551765 GATC-001 protein_coding Homo_sapiens 6e-26 124
ENST00000560043 RP11-752G15.4-001 processed_pseudogene Homo_sapiens 0 484
ENST00000603963 SRSF9-006 nonsense_mediated_decay Homo_sapiens 0 370

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