C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | ribonuclease, RNase K | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000548577  |
RNASEK-001 |
ENSG00000219200 |
9606 | + |
17:7012417-7014532  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0006SP | CIL_0006SP_0002 | CGP | 17:7012417-7017520 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004521 | IDA | endoribonuclease activity |
| GO:0005575 | ND | cellular_component |
| GO:0009303 | IDA | rRNA transcription |
| GO:0016021 | IEA | integral component of membrane |
| GO:0090502 | IEA | RNA phosphodiester bond hydrolysis, endonucleolytic |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000176268
|
Gm21988-002 | nonsense_mediated_decay | Mus_musculus | 0 | 484 |
|
ENSMUST00000040428
|
Rnasek-001 | protein_coding | Mus_musculus | 0 | 484 |
|
ENSMUST00000176116
|
Gm21988-001 | nonsense_mediated_decay | Mus_musculus | 0 | 459 |
|
ENSMUST00000141880
|
Rnasek-003 | protein_coding | Mus_musculus | 0 | 353 |
|
ENSMUST00000125752
|
Rnasek-002 | nonsense_mediated_decay | Mus_musculus | 0 | 353 |
