C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000550757 RP11-114H23.3-001 ENSG00000258245 9606 - 12:75688794-75689096 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLungMuscleOvaryTestisENST00000550757
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Lung Muscle Ovary Testis
ENST00000550757 0.128±0.00 0.769±0.00 0.077±0.00 0.074±0.00 0.399±0.00 0.144±0.00 0.271±0.00 0.400±0.00 0.437±0.00 0.126±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119438 Rpl10-ps1-001 transcribed_processed_pseudogene Mus_musculus 0 318
ENSMUST00000121321 Rpl10-ps6-001 processed_pseudogene Mus_musculus 0 318
ENSMUST00000074085 Rpl10-002 protein_coding Mus_musculus 0 318
ENSMUST00000008826 Rpl10-001 protein_coding Mus_musculus 0 318
ENSMUST00000076364 Rpl10-ps3-201 protein_coding Mus_musculus 0 318
ENSMUST00000151702 Rpl10-003 protein_coding Mus_musculus 0 296
ENSMUST00000187303 RP23-435I22.2-001 processed_pseudogene Mus_musculus 0 285
ENSMUST00000076465 Gm5621-201 processed_pseudogene Mus_musculus 0 285
ENSMUST00000075377 Gm6564-201 processed_pseudogene Mus_musculus 0 254
ENSMUST00000081908 Rpl10l-001 protein_coding Mus_musculus 0 252
ENSMUST00000121511 Gm14460-001 processed_pseudogene Mus_musculus 0 246
ENSMUST00000117120 Rpl10-ps4-001 processed_pseudogene Mus_musculus 0 219
ENSMUST00000135690 Rpl10-011 protein_coding Mus_musculus 3.99931e-42 174
ENSMUST00000134330 Rpl10-009 retained_intron Mus_musculus 4e-37 158

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