C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: acid-sensing (proton-gated) ion channel 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000551199 ASIC1-004 ENSG00000110881 9606 + 12:50070740-50080782 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonENST00000551199
Transcript ID Colon
ENST00000551199 0.205±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PE CIL_0008PE_0001 VISTA 12:49905565-50507504
CIL_0008CC CIL_0008CC_0001 VISTA 12:49906068-50507455
CIL_00071Y CIL_00071Y_0001 CGP 12:49976923-50083611

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023758 Asic1-201 protein_coding Mus_musculus 0 872
ENSDART00000028603 asic1b-201 protein_coding Danio_rerio 0 512
ENSDART00000140236 asic1b-001 protein_coding Danio_rerio 0 512
ENSDART00000105541 asic1a-201 protein_coding Danio_rerio 0 370
ENSDART00000004588 asic1a-001 protein_coding Danio_rerio 0 370

Loading