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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | LIM domain and actin binding 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000551691  |
LIMA1-009 |
ENSG00000050405 |
9606 | - |
12:50222260-50283484  |
protein_coding |
|
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Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008PE | CIL_0008PE_0001 | VISTA | 12:49905565-50507504 |
| CIL_0008CC | CIL_0008CC_0001 | VISTA | 12:49906068-50507455 |
| CIL_0000LJ | CIL_0000LJ_0001 | CGP | 12:50129306-50283546 |
| CIL_00051T | CIL_00051T_0001 | CGP | 12:50175788-50396622 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0030835 | IEA | negative regulation of actin filament depolymerization |
| GO:0051015 | IEA | actin filament binding |
| GO:0051017 | IEA | actin filament bundle assembly |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000073691
|
Lima1-001 | protein_coding | Mus_musculus | 0 | 407 |
|
ENSMUST00000171450
|
Lima1-002 | retained_intron | Mus_musculus | 0 | 195 |
|
ENSMUST00000109024
|
Lima1-003 | protein_coding | Mus_musculus | 5.99756e-43 | 178 |
