C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: LIM domain and actin binding 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000551691 LIMA1-009 ENSG00000050405 9606 - 12:50222260-50283484 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PE CIL_0008PE_0001 VISTA 12:49905565-50507504
CIL_0008CC CIL_0008CC_0001 VISTA 12:49906068-50507455
CIL_0000LJ CIL_0000LJ_0001 CGP 12:50129306-50283546
CIL_00051T CIL_00051T_0001 CGP 12:50175788-50396622

Gene Ontology

GO IDEvidence TypeGO Description
GO:0030835 IEA negative regulation of actin filament depolymerization
GO:0051015 IEA actin filament binding
GO:0051017 IEA actin filament bundle assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000073691 Lima1-001 protein_coding Mus_musculus 0 407
ENSMUST00000171450 Lima1-002 retained_intron Mus_musculus 0 195
ENSMUST00000109024 Lima1-003 protein_coding Mus_musculus 5.99756e-43 178

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