C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: suppressor of cytokine signaling 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000551883 SOCS2-012 ENSG00000120833 9606 + 12:93574965-93576019 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonLiverLungENST00000551883
Transcript ID Adrenal Brain Breast Colon Liver Lung
ENST00000551883 13.577±0.00 2.237±0.00 5.070±0.00 8.980±0.00 4.669±0.00 17.112±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000155148 Socs2-011 processed_transcript Mus_musculus 0 281
ENSMUST00000172070 Socs2-202 protein_coding Mus_musculus 0 279
ENSMUST00000170690 Socs2-201 protein_coding Mus_musculus 0 279
ENSMUST00000119917 Socs2-008 protein_coding Mus_musculus 0 279
ENSMUST00000134918 Socs2-009 processed_transcript Mus_musculus 0 279
ENSMUST00000020215 Socs2-001 protein_coding Mus_musculus 0 279
ENSMUST00000052528 Gm9847-201 protein_coding Mus_musculus 0 279
ENSMUST00000139210 Socs2-002 nonsense_mediated_decay Mus_musculus 0 278
ENSMUST00000188378 RP23-458B6.3-001 unprocessed_pseudogene Mus_musculus 0 246
ENSMUST00000128854 Socs2-010 processed_transcript Mus_musculus 2e-29 134

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