C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: suppressor of cytokine signaling 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000139210 Socs2-002 ENSMUSG00000020027 10090 - 10:95385362-95413109 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartMuscleOvaryTestisENSMUST00000139210
Transcript ID Adipose Bladder Brain Breast Heart Muscle Ovary Testis
ENSMUST00000139210 0.405±0.00 0.602±0.01 2.163±0.03 0.837±0.00 1.329±0.00 0.368±0.12 2.602±0.00 0.009±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004YM CIL_0004YM_0002 CGP 10:95174746-95417180

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000340600 SOCS2-001 protein_coding Homo_sapiens 0 625
ENST00000444011 RP3-522J7.5-001 processed_pseudogene Homo_sapiens 8.00001e-41 171
ENST00000536696 SOCS2-007 protein_coding Homo_sapiens 0 625
ENST00000548091 SOCS2-008 protein_coding Homo_sapiens 0 416
ENST00000548537 SOCS2-005 protein_coding Homo_sapiens 0 625
ENST00000549122 SOCS2-006 protein_coding Homo_sapiens 0 625
ENST00000549206 SOCS2-002 protein_coding Homo_sapiens 0 625
ENST00000549510 SOCS2-013 protein_coding Homo_sapiens 9.99995e-41 171
ENST00000549887 SOCS2-009 protein_coding Homo_sapiens 0 466
ENST00000551556 SOCS2-011 protein_coding Homo_sapiens 0 625
ENST00000551883 SOCS2-012 protein_coding Homo_sapiens 0 278
ENST00000622746 SOCS2-201 protein_coding Homo_sapiens 0 625

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