C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: DEAD (Asp-Glu-Ala-Asp) box polypeptide 23
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000552512 DDX23-004 ENSG00000174243 9606 - 12:48838015-48852141 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaTestisENST00000552512
Transcript ID Placenta Testis
ENST00000552512 16.153±0.00 19.285±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003DO CIL_0003DO_0002 CGP 12:48813794-48852842
CIL_00000F CIL_00000F_0001 CGP 12:48829764-48865898

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005739 IDA mitochondrion
GO:0005886 IDA plasma membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000003450 Ddx23-001 protein_coding Mus_musculus 0 662
ENSMUST00000161030 Ddx23-004 retained_intron Mus_musculus 0 569
ENSMUST00000160506 Ddx23-002 retained_intron Mus_musculus 0 569
ENSMUST00000159423 Ddx23-003 retained_intron Mus_musculus 0 488
ENSMUST00000162384 Ddx23-006 protein_coding Mus_musculus 0 309
ENSMUST00000159170 Ddx23-005 retained_intron Mus_musculus 0 274

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