C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cornichon family AMPA receptor auxiliary protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000553660 CNIH1-007 ENSG00000100528 9606 - 14:54427425-54441357 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000553660
Transcript ID Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000553660 6.690±0.00 2.022±0.00 7.165±0.00 10.925±4.07 4.961±3.09 14.316±0.00 17.213±0.00 7.594±0.00 6.980±0.00 20.871±9.44 20.782±5.94 20.229±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KQ CIL_0008KQ_0001 VISTA 14:53920865-54521777
CIL_00090Z CIL_00090Z_0001 VISTA 14:53923660-54524764
CIL_0000HQ CIL_0000HQ_0001 CGP 14:54396849-54441431
CIL_0000HV CIL_0000HV_0001 CGP 14:54423560-54489196

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016020 IEA membrane
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000146629 Cnih1-002 nonsense_mediated_decay Mus_musculus 0 909
ENSMUST00000015903 Cnih1-001 protein_coding Mus_musculus 0 909

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