C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SET pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000553886 SETP2-001 ENSG00000258893 9606 + 14:51436038-51436963 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonKidneyLiverMuscleOvaryPlacentaTestisENST00000553886
Transcript ID Bladder Brain Breast Colon Kidney Liver Muscle Ovary Placenta Testis
ENST00000553886 0.072±0.00 0.011±0.00 0.011±0.00 0.010±0.00 0.011±0.00 0.093±0.00 0.010±0.00 0.028±0.02 0.028±0.02 0.043±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00069M CIL_00069M_0002 CGP 14:51240162-51730727

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000067996 Set-002 protein_coding Mus_musculus 0 846
ENSMUST00000125824 Set-005 processed_transcript Mus_musculus 0 846
ENSMUST00000102866 Set-001 protein_coding Mus_musculus 0 846
ENSMUST00000183511 Gm9531-001 transcribed_processed_pseudogene Mus_musculus 0 830
ENSMUST00000121098 Gm12642-001 processed_pseudogene Mus_musculus 0 715
ENSMUST00000134364 Set-004 protein_coding Mus_musculus 0 701
ENSMUST00000118921 Gm11877-001 processed_pseudogene Mus_musculus 0 688
ENSMUST00000120309 Gm14746-001 processed_pseudogene Mus_musculus 0 636
ENSMUST00000137291 Set-006 processed_transcript Mus_musculus 0 579
ENSMUST00000190284 RP24-492P7.1-001 processed_pseudogene Mus_musculus 0 549
ENSMUST00000120258 Gm16420-001 processed_pseudogene Mus_musculus 0 496
ENSMUST00000149578 Set-003 protein_coding Mus_musculus 0 472
ENSMUST00000121657 Gm12752-001 processed_pseudogene Mus_musculus 0 422
ENSMUST00000184206 Gm8676-001 processed_pseudogene Mus_musculus 0 270
ENSMUST00000147590 Set-007 processed_transcript Mus_musculus 0 270
ENSMUST00000055820 Gm9531-002 processed_transcript Mus_musculus 0 191

Loading