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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | SKI family transcriptional corepressor 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000554054  |
SKOR1-004 |
ENSG00000188779 |
9606 | + |
15:67825516-67834555  |
protein_coding |
|
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Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008DX | CIL_0008DX_0001 | VISTA | 15:67486945-68088375 |
| CIL_00098T | CIL_00098T_0001 | VISTA | 15:67539824-68142788 |
| CIL_0008FO | CIL_0008FO_0001 | VISTA | 15:67583922-68185582 |
| CIL_0004L4 | CIL_0004L4_0002 | CGP | 15:67819704-68198603 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003714 | IEA | transcription corepressor activity |
| GO:0005634 | IEA | nucleus |
| GO:0030514 | IEA | negative regulation of BMP signaling pathway |
| GO:0046332 | IEA | SMAD binding |
| GO:2001141 | IEA | regulation of RNA biosynthetic process |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000119146
|
Skor1-001 | protein_coding | Mus_musculus | 0 | 3371 |
|
ENSMUST00000055281
|
Skor1-002 | protein_coding | Mus_musculus | 0 | 3301 |
|
ENSMUST00000116613
|
Skor1-003 | protein_coding | Mus_musculus | 0 | 3301 |
|
ENSDART00000126643
|
SKOR2-203 | protein_coding | Danio_rerio | 0 | 436 |
|
ENSDART00000124640
|
SKOR2-202 | protein_coding | Danio_rerio | 0 | 436 |
|
ENSDART00000101289
|
SKOR2-201 | protein_coding | Danio_rerio | 0 | 436 |
|
ENSDART00000100104
|
skor1a-001 | protein_coding | Danio_rerio | 0 | 265 |
