C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008FO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm211 VISTA 9606 15:67583922-68185582
GeneTranscriptPositionBiotype
ENSG00000033800 (PIAS1)
protein inhibitor of activated STAT, 1 		ENST00000249636 (PIAS1-001) 68054179-68193846 protein_coding
ENST00000545237 (PIAS1-002) 68054576-68188064 protein_coding
ENST00000562190 (PIAS1-005) 68054318-68142339 nonsense_mediated_decay
ENST00000563996 (PIAS1-003) 68181211-68190758 nonsense_mediated_decay
ENST00000564009 (PIAS1-004) 68146662-68153961 retained_intron
ENST00000564915 (PIAS1-007) 68054309-68142339 nonsense_mediated_decay
ENST00000567417 (PIAS1-006) 68176538-68181873 processed_transcript
ENST00000611270 (PIAS1-008) 68191682-68198603 processed_transcript
ENSG00000137764 (MAP2K5)
mitogen-activated protein kinase kinase 5 		ENST00000178640 (MAP2K5-001) 67542709-67807123 protein_coding
ENST00000340972 (MAP2K5-002) 67640553-67807113 protein_coding
ENST00000354498 (MAP2K5-005) 67548998-67807111 protein_coding
ENST00000395476 (MAP2K5-013) 67543331-67807117 protein_coding
ENST00000439036 (MAP2K5-003) 67563300-67641489 protein_coding
ENST00000557869 (MAP2K5-009) 67703358-67769929 protein_coding
ENST00000558021 (MAP2K5-008) 67748368-67769905 retained_intron
ENST00000558274 (MAP2K5-010) 67717997-67806732 processed_transcript
ENST00000558392 (MAP2K5-007) 67585742-67807083 retained_intron
ENST00000559262 (MAP2K5-006) 67585890-67679956 protein_coding
ENST00000560086 (MAP2K5-012) 67546153-67550075 processed_transcript
ENST00000560591 (MAP2K5-004) 67543263-67659356 processed_transcript
ENSG00000188779 (SKOR1)
SKI family transcriptional corepressor 1 		ENST00000341418 (SKOR1-001) 67819704-67834561 protein_coding
ENST00000380035 (SKOR1-003) 67825545-67834555 protein_coding
ENST00000554054 (SKOR1-004) 67825516-67834555 protein_coding
ENST00000554240 (SKOR1-002) 67823557-67834538 protein_coding
ENSG00000245719 (RP11-34F13.2)
 ENST00000502156 (RP11-34F13.2-001) 67834310-67838879 lincRNA
ENSG00000259410 (RP11-34F13.3)
 ENST00000558889 (RP11-34F13.3-001) 67832725-67873866 lincRNA
ENST00000560577 (RP11-34F13.3-002) 67833082-67873866 retained_intron
ENSG00000259512 (HNRNPA1P5)
heterogeneous nuclear ribonucleoprotein A1 pseudogene 5 		ENST00000558213 (HNRNPA1P5-001) 67627852-67629135 processed_pseudogene
ENSG00000260109 (RP11-883G10.1)
 ENST00000568867 (RP11-883G10.1-001) 67985059-67986288 unprocessed_pseudogene
ENSG00000261702 (RP11-282M16.1)
 ENST00000567857 (RP11-282M16.1-001) 67974391-67974625 processed_pseudogene
CIL_0008FO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm211 VISTA 10090 9:62808235-63410238
GeneTranscriptPositionBiotype
ENSMUSG00000022245 (Skor1)
SKI family transcriptional corepressor 1 		ENSMUST00000055281 (Skor1-002) 63138176-63146980 protein_coding
ENSMUST00000116613 (Skor1-003) 63138170-63148961 protein_coding
ENSMUST00000119146 (Skor1-001) 63138170-63147011 protein_coding
ENSMUSG00000032244 (Fem1b)
feminization 1 homolog b (C. elegans) 		ENSMUST00000034775 (Fem1b-201) 62791832-62811648 protein_coding
ENSMUSG00000032245 (Cln6)
ceroid-lipofuscinosis, neuronal 6 		ENSMUST00000034776 (Cln6-001) 62838785-62852006 protein_coding
ENSMUST00000124984 (Cln6-004) 62847033-62851162 protein_coding
ENSMUST00000138276 (Cln6-003) 62846015-62850711 nonsense_mediated_decay
ENSMUST00000141821 (Cln6-002) 62838792-62846018 nonsense_mediated_decay
ENSMUSG00000032246 (Calml4)
calmodulin-like 4 		ENSMUST00000034777 (Calml4-201) 62858104-62875918 protein_coding
ENSMUST00000163820 (Calml4-202) 62858104-62875918 protein_coding
ENSMUSG00000032403 (2300009A05Rik)
RIKEN cDNA 2300009A05 gene 		ENSMUST00000168665 (2300009A05Rik-001) 63394447-63399241 protein_coding
ENSMUST00000185528 (2300009A05Rik-002) 63397476-63399246 retained_intron
ENSMUST00000186165 (2300009A05Rik-003) 63394447-63398827 processed_transcript
ENSMUST00000187234 (2300009A05Rik-004) 63394448-63398827 processed_transcript
ENSMUSG00000032405 (Pias1)
protein inhibitor of activated STAT 1 		ENSMUST00000098651 (Pias1-201) 62880077-62980879 protein_coding
ENSMUSG00000058444 (Map2k5)
mitogen-activated protein kinase kinase 5 		ENSMUST00000034920 (Map2k5-201) 63163769-63377902 protein_coding
ENSMUSG00000094201 (Gm25064)
predicted gene, 25064 		ENSMUST00000179535 (Gm25064-201) 63133283-63133389 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008FO_0001ENSG00000033800ENST00000249636ENST00000545237ENST00000562190ENST00000563996ENST00000564009ENST00000564915ENST00000567417ENST00000611270ENSG00000137764ENST00000178640ENST00000340972ENST00000354498ENST00000395476ENST00000439036ENST00000557869ENST00000558021ENST00000558274ENST00000558392ENST00000559262ENST00000560086ENST00000560591ENSG00000188779ENST00000341418ENST00000380035ENST00000554054ENST00000554240ENSG00000245719ENST00000502156ENSG00000259410ENST00000558889ENST00000560577ENSG00000259512ENST00000558213ENSG00000260109ENST00000568867ENSG00000261702ENST00000567857CIL_0008FO_0002ENSMUSG00000022245ENSMUST00000055281ENSMUST00000116613ENSMUST00000119146ENSMUSG00000032244ENSMUST00000034775ENSMUSG00000032245ENSMUST00000034776ENSMUST00000124984ENSMUST00000138276ENSMUST00000141821ENSMUSG00000032246ENSMUST00000034777ENSMUST00000163820ENSMUSG00000032403ENSMUST00000168665ENSMUST00000185528ENSMUST00000186165ENSMUST00000187234ENSMUSG00000032405ENSMUST00000098651ENSMUSG00000058444ENSMUST00000034920ENSMUSG00000094201ENSMUST00000179535
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008FO_0001ENSG00000033800ENST00000249636ENST00000545237ENST00000564915ENSG00000137764ENST00000178640ENST00000354498ENST00000395476ENST00000439036ENST00000558392ENST00000559262ENST00000560591ENSG00000188779ENST00000341418ENST00000554240ENSG00000245719ENST00000502156ENSG00000259410ENST00000558889ENST00000560577ENSG00000259512ENST00000558213ENSG00000260109ENST00000568867ENSG00000261702ENST00000567857CIL_0008FO_0002ENSMUSG00000022245ENSMUST00000055281ENSMUST00000116613ENSMUST00000119146ENSMUSG00000032244ENSMUST00000034775ENSMUSG00000032245ENSMUST00000034776ENSMUST00000138276ENSMUSG00000032246ENSMUST00000034777ENSMUST00000163820ENSMUSG00000032403ENSMUST00000168665ENSMUST00000185528ENSMUSG00000032405ENSMUST00000098651ENSMUSG00000058444ENSMUST00000034920ENSMUSG00000094201ENSMUST00000179535
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000033800 ENST00000249636 N/A N/A N/A N/A 2.226±0.00 N/A 3.165±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000545237 N/A N/A 2.873±0.00 6.995±0.00 N/A N/A 4.154±1.04 4.264±0.00 5.523±3.55 6.373±0.74 2.468±0.73 5.584±1.26 3.785±0.13 9.692±0.83
ENST00000562190 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563996 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564009 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564915 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.136±0.00 N/A N/A N/A
ENST00000567417 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611270 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000137764 ENST00000178640 8.399±0.00 2.934±0.00 0.596±0.00 4.729±3.14 2.777±2.04 5.169±3.96 3.106±2.92 5.845±0.00 1.930±0.00 4.237±0.00 7.542±0.00 7.902±0.85 5.983±0.69 8.279±1.19
ENST00000340972 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000354498 N/A N/A N/A 0.660±0.00 N/A 3.744±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000395476 N/A 1.753±0.00 N/A N/A 2.359±0.00 N/A N/A 0.760±0.58 1.044±0.00 1.526±0.00 1.789±0.00 1.332±0.74 3.692±1.81 N/A
ENST00000439036 N/A N/A N/A N/A N/A N/A N/A N/A 3.822±0.00 N/A 3.492±0.00 10.739±0.00 13.931±0.00 5.881±0.00
ENST00000557869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558021 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558274 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558392 N/A N/A N/A 1.767±0.00 N/A N/A N/A N/A N/A N/A N/A 1.562±0.00 N/A 3.511±0.00
ENST00000559262 N/A N/A N/A N/A N/A N/A N/A 0.612±0.00 N/A N/A N/A N/A N/A N/A
ENST00000560086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560591 N/A N/A 0.606±0.00 N/A N/A N/A N/A N/A 1.428±0.00 1.227±0.00 N/A 0.639±0.00 N/A N/A
ENSG00000188779 ENST00000341418 0.035±0.00 N/A N/A N/A 0.117±0.00 N/A 0.010±0.00 N/A N/A N/A N/A 0.108±0.00 N/A N/A
ENST00000380035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554240 N/A 0.195±0.00 0.099±0.00 0.574±0.00 0.038±0.00 N/A 0.105±0.00 0.022±0.00 N/A 0.038±0.02 N/A 0.207±0.00 0.116±0.06 N/A
ENSG00000245719 ENST00000502156 N/A N/A N/A 0.266±0.00 0.058±0.00 N/A N/A 0.024±0.00 0.062±0.00 N/A N/A N/A 0.064±0.00 N/A
ENSG00000259410 ENST00000558889 N/A N/A N/A N/A N/A N/A 0.176±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000560577 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.588±0.00 N/A N/A N/A 0.683±0.00
ENSG00000259512 ENST00000558213 0.028±0.00 0.100±0.00 0.309±0.00 0.074±0.00 0.014±0.00 0.089±0.08 0.045±0.02 N/A 0.082±0.00 0.165±0.00 0.013±0.00 0.378±0.02 0.081±0.00 0.158±0.15
ENSG00000260109 ENST00000568867 N/A 0.022±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000261702 ENST00000567857 N/A N/A N/A N/A N/A N/A N/A N/A 0.051±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022245 ENSMUST00000055281 N/A 0.009±0.00 N/A N/A N/A 0.008±0.00 N/A N/A 0.001±0.00 N/A N/A 0.013±0.01 N/A N/A
ENSMUST00000116613 0.025±0.02 N/A 0.035±0.00 2.354±2.81 0.018±0.01 N/A 0.019±0.00 0.012±0.00 0.011±0.01 0.007±0.00 0.038±0.02 0.020±0.01 0.043±0.03 0.637±0.15
ENSMUST00000119146 0.002±0.00 0.034±0.02 N/A 2.243±1.32 0.046±0.04 0.030±0.02 N/A 0.009±0.00 0.008±0.01 0.014±0.01 N/A 0.035±0.02 0.037±0.00 N/A
ENSMUSG00000032244 ENSMUST00000034775 6.328±2.69 9.533±0.42 6.185±0.14 20.332±3.53 7.336±2.65 5.710±0.30 3.208±0.29 5.537±0.37 4.581±2.38 11.185±0.70 2.588±0.31 14.481±3.04 25.017±4.76 44.825±15.95
ENSMUSG00000032245 ENSMUST00000034776 14.834±5.53 23.752±1.01 12.190±0.69 3.015±1.21 17.482±0.70 26.076±2.76 8.751±2.19 28.033±1.55 7.531±5.96 17.535±0.81 6.155±0.40 21.843±7.25 27.855±16.98 31.680±15.53
ENSMUST00000124984 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138276 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.475±0.00
ENSMUST00000141821 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000032246 ENSMUST00000034777 2.349±1.47 0.403±0.19 5.161±1.17 1.692±0.43 1.003±0.26 34.315±5.05 0.602±0.03 104.985±4.76 0.593±0.38 7.053±1.10 0.728±0.28 5.257±2.72 3.941±2.14 1.826±1.56
ENSMUST00000163820 1.104±0.39 0.713±0.28 5.126±0.23 1.832±0.07 1.239±1.21 6.445±0.98 0.400±0.21 52.791±16.41 0.685±0.37 N/A 0.443±0.29 3.072±1.90 3.840±1.38 2.207±1.55
ENSMUSG00000032403 ENSMUST00000168665 N/A N/A 3.238±0.25 N/A 1.280±0.00 N/A 3.081±0.65 4.299±0.00 2.140±0.47 N/A 7.051±1.83 10.944±0.00 3.875±2.36 N/A
ENSMUST00000185528 N/A N/A 0.624±0.06 0.710±0.00 0.244±0.00 N/A N/A N/A 0.503±0.04 N/A 0.577±0.09 1.355±0.14 0.596±0.22 N/A
ENSMUST00000186165 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000032405 ENSMUST00000098651 9.663±3.91 10.835±2.03 4.960±0.69 3.807±1.91 14.243±3.25 11.534±2.70 4.091±0.23 10.076±1.98 6.802±1.14 20.611±6.44 0.707±0.38 16.823±7.71 9.049±2.42 59.429±29.29
ENSMUSG00000058444 ENSMUST00000034920 13.247±0.37 33.349±4.21 9.187±0.70 18.543±2.02 19.498±9.15 12.960±3.51 7.596±2.15 11.966±1.05 8.125±3.19 15.259±4.36 5.711±0.36 24.913±7.85 16.295±8.12 16.051±4.91
ENSMUSG00000094201 ENSMUST00000179535 N/A N/A N/A 2.435±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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