C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DDB1 and CUL4 associated factor 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000554215 DCAF5-005 ENSG00000139990 9606 - 14:69051855-69152599 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000554215
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000554215 6.848±0.00 10.074±0.00 1.702±0.00 2.335±0.00 3.850±1.95 5.331±2.72 2.688±0.00 5.727±3.14 3.480±0.00 7.474±0.00 2.685±0.00 5.659±3.10 4.813±0.00 9.104±0.65

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001JZ CIL_0001JZ_0002 CGP 14:68874143-69153150
CIL_0002CH CIL_0002CH_0001 CGP 14:69050881-69244020

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0016567 IEA protein ubiquitination
GO:0080008 IDA Cul4-RING E3 ubiquitin ligase complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000054145 Dcaf5-201 protein_coding Mus_musculus 0 3271

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