C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ras homolog family member J
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000555125 RHOJ-005 ENSG00000126785 9606 + 14:63204859-63283255 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLungMuscleOvaryPlacentaTestisENST00000555125
Transcript ID Heart Lung Muscle Ovary Placenta Testis
ENST00000555125 0.606±0.00 23.962±0.00 0.132±0.00 1.469±0.00 2.393±0.00 0.898±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006SH CIL_0006SH_0002 CGP 14:62699454-63293219
CIL_0000S2 CIL_0000S2_0001 CGP 14:63204114-63318879

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0006184 IEA GTP catabolic process
GO:0007165 IEA signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118966 Rhoj-002 protein_coding Mus_musculus 0 592
ENSMUST00000118602 Rhoj-003 protein_coding Mus_musculus 0 592
ENSMUST00000055390 Rhoj-001 protein_coding Mus_musculus 0 586
ENSMUST00000146096 Rhoj-004 retained_intron Mus_musculus 0 278
ENSMUST00000172981 Rhoj-005 nonsense_mediated_decay Mus_musculus 3.00004e-41 172

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