C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: prostaglandin reductase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000555228 PTGR2-004 ENSG00000140043 9606 + 14:73851844-73885456 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartENST00000555228
Transcript ID Heart
ENST00000555228 13.871±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089E CIL_00089E_0001 VISTA 14:73441559-74042582
CIL_0003PQ CIL_0003PQ_0001 CGP 14:73715122-73886827

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0006693 IDA prostaglandin metabolic process
GO:0008270 IEA zinc ion binding
GO:0016491 IEA oxidoreductase activity
GO:0036132 IEA 13-prostaglandin reductase activity
GO:0047522 IDA 15-oxoprostaglandin 13-oxidase activity
GO:0055114 IEA oxidation-reduction process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000146377 Ptgr2-006 protein_coding Mus_musculus 0 1116
ENSMUST00000123614 Ptgr2-001 protein_coding Mus_musculus 0 1116
ENSMUST00000135001 Ptgr2-002 protein_coding Mus_musculus 0 1064
ENSMUST00000147363 Ptgr2-005 protein_coding Mus_musculus 0 1029
ENSMUST00000123693 Ptgr2-003 nonsense_mediated_decay Mus_musculus 0 946
ENSMUST00000138733 Ptgr2-004 retained_intron Mus_musculus 0 405
ENSMUST00000128541 Ptgr2-008 processed_transcript Mus_musculus 0 265
ENSMUST00000150720 Ptgr2-009 processed_transcript Mus_musculus 7e-33 147
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.000004 58

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