C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000555320 RP11-757H14.2-001 ENSG00000258452 9606 + 14:80822524-80822796 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungMuscleENST00000555320
Transcript ID Lung Muscle
ENST00000555320 0.072±0.00 0.062±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004TZ CIL_0004TZ_0001 CGP 14:80197527-80959517
CIL_00064H CIL_00064H_0002 CGP 14:80476983-81146302

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000178676 Gm10182-201 processed_pseudogene Mus_musculus 0 344
ENSMUST00000102552 Hmgn2-003 protein_coding Mus_musculus 0 344
ENSMUST00000102553 Hmgn2-001 protein_coding Mus_musculus 0 344
ENSMUST00000075602 Gm10282-201 protein_coding Mus_musculus 0 344
ENSMUST00000121537 Gm7931-001 processed_pseudogene Mus_musculus 0 339
ENSMUST00000189273 RP23-429J21.2-001 processed_pseudogene Mus_musculus 0 329
ENSMUST00000093430 Gm7125-201 processed_pseudogene Mus_musculus 0 327
ENSMUST00000137456 Hmgn2-010 processed_transcript Mus_musculus 0 326
ENSMUST00000138458 Hmgn2-004 processed_transcript Mus_musculus 0 326
ENSMUST00000105893 Hmgn2-009 protein_coding Mus_musculus 0 326
ENSMUST00000123234 Hmgn2-012 protein_coding Mus_musculus 0 322
ENSMUST00000125266 Hmgn2-011 processed_transcript Mus_musculus 0 322
ENSMUST00000120716 Hmgn2-ps1-001 processed_pseudogene Mus_musculus 0 316
ENSMUST00000100472 Hmgn2-007 protein_coding Mus_musculus 0 316
ENSMUST00000159886 Gm10357-001 processed_pseudogene Mus_musculus 0 313
ENSMUST00000189471 RP24-176P22.2-001 processed_pseudogene Mus_musculus 0 300
ENSMUST00000120483 Gm14008-001 processed_pseudogene Mus_musculus 0 300
ENSMUST00000153622 Hmgn2-013 retained_intron Mus_musculus 0 296
ENSMUST00000136327 Hmgn2-006 protein_coding Mus_musculus 0 296
ENSMUST00000097278 Gm6594-201 protein_coding Mus_musculus 0 257
ENSMUST00000118775 Gm15195-001 processed_pseudogene Mus_musculus 0 252
ENSMUST00000165525 Gm16494-201 protein_coding Mus_musculus 0 252
ENSMUST00000071770 Gm5899-201 processed_pseudogene Mus_musculus 0 241
ENSMUST00000130809 Hmgn2-005 retained_intron Mus_musculus 0 233
ENSMUST00000145025 Hmgn2-002 retained_intron Mus_musculus 0 233
ENSMUST00000120954 Gm12196-001 processed_pseudogene Mus_musculus 0 230
ENSMUST00000153501 Gm16510-001 processed_pseudogene Mus_musculus 1.4013e-45 185
ENSMUST00000136859 Hmgn2-008 retained_intron Mus_musculus 1.4013e-45 185

Loading