C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: paired box 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000555548 PAX3-010 ENSG00000135903 9606 - 2:222202137-222221410 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonMuscleENST00000555548
Transcript ID Brain Breast Colon Muscle
ENST00000555548 0.130±0.00 1.535±0.00 0.310±0.00 3.486±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006XL CIL_0006XL_0001 CGP 2:221418027-222298996
CIL_0008C0 CIL_0008C0_0001 VISTA 2:221914664-222515720
CIL_0008LF CIL_0008LF_0001 VISTA 2:221986023-222587201

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000087086 Pax3-001 protein_coding Mus_musculus 0 667
ENSMUST00000004994 Pax3-002 protein_coding Mus_musculus 0 667

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