C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 260
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000556422 TMEM260-002 ENSG00000070269 9606 + 14:56579620-56649515 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLungMusclePlacentaENST00000556422
Transcript ID Brain Lung Muscle Placenta
ENST00000556422 0.722±0.00 0.498±0.00 0.155±0.00 0.410±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000601 CIL_000601_0002 CGP 14:56117814-56650606
CIL_000602 CIL_000602_0002 CGP 14:56488354-56810479

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111735 Tmem260-001 protein_coding Mus_musculus 0 1884
ENSMUST00000156480 Tmem260-003 retained_intron Mus_musculus 0 1066
ENSMUST00000133744 Tmem260-002 retained_intron Mus_musculus 0 1066
ENSMUST00000124720 Tmem260-005 protein_coding Mus_musculus 0 891
ENSMUST00000153765 Tmem260-004 nonsense_mediated_decay Mus_musculus 0 664

Loading