C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thioredoxin-related transmembrane protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000556683 TMX1-003 ENSG00000139921 9606 + 14:51240250-51255654 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000556683
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000556683 10.650±0.00 5.701±0.00 0.996±0.00 3.769±0.31 7.279±1.00 5.872±0.10 1.861±0.67 4.510±0.00 4.839±2.83 5.478±1.34 0.577±0.18 3.568±1.86 5.839±5.06 5.792±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00069N CIL_00069N_0002 CGP 14:50975262-51257546
CIL_00069M CIL_00069M_0002 CGP 14:51240162-51730727

Gene Ontology

GO IDEvidence TypeGO Description
GO:0045454 IEA cell redox homeostasis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021471 Tmx1-001 protein_coding Mus_musculus 0 553
ENSMUST00000162277 Tmx1-002 nonsense_mediated_decay Mus_musculus 2.00386e-43 182

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