C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: papilin, proteoglycan-like sulfated glycoprotein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000557061 PAPLN-009 ENSG00000100767 9606 + 14:73261156-73274620 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLungENST00000557061
Transcript ID Breast Lung
ENST00000557061 0.893±0.19 0.765±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008P0 CIL_0008P0_0001 VISTA 14:72878760-73482269
CIL_0001TQ CIL_0001TQ_0001 CGP 14:73136418-73274640
CIL_0001TR CIL_0001TR_0001 CGP 14:73237497-73463642

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004867 IEA serine-type endopeptidase inhibitor activity
GO:0010951 IEA negative regulation of endopeptidase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021646 Papln-002 protein_coding Mus_musculus 0 1146
ENSMUST00000121733 Papln-001 protein_coding Mus_musculus 0 1146
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.00002 57

Loading