C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein C (C1/C2)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000557157 HNRNPC-037 ENSG00000092199 9606 - 14:21211224-21231422 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonLiverOvaryENST00000557157
Transcript ID Bladder Brain Colon Liver Ovary
ENST00000557157 22.720±0.00 43.812±0.00 17.259±0.00 27.997±0.00 69.051±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00027N CIL_00027N_0001 CGP 14:21154865-21269494
CIL_00027O CIL_00027O_0001 CGP 14:21209136-21351301

Gene Ontology

GO IDEvidence TypeGO Description
GO:0038032 IEA termination of G-protein coupled receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000122361 Gm12696-001 processed_pseudogene Mus_musculus 0 787
ENSMUST00000164655 Hnrnpc-202 protein_coding Mus_musculus 0 688
ENSMUST00000111610 Hnrnpc-201 protein_coding Mus_musculus 0 688
ENSMUST00000117947 Gm12445-001 processed_pseudogene Mus_musculus 0 625
ENSMUST00000174284 Gm18889-001 processed_pseudogene Mus_musculus 0 510

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