C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: sorting nexin 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000557265 SNX6-005 ENSG00000129515 9606 - 14:34586230-34630158 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENST00000557265
Transcript ID Ovary
ENST00000557265 17.892±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RR CIL_0008RR_0001 VISTA 14:33972978-34576380
CIL_0005RF CIL_0005RF_0002 CGP 14:34515929-34630183
CIL_0005RE CIL_0005RE_0002 CGP 14:34561094-34714823

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006886 IEA intracellular protein transport
GO:0035091 IEA phosphatidylinositol binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000005798 Snx6-201 protein_coding Mus_musculus 0 741

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