C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NDRG family member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000557353 NDRG2-014 ENSG00000165795 9606 - 14:21016773-21025061 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeColonLungOvaryTestisENST00000557353
Transcript ID Adipose Colon Lung Ovary Testis
ENST00000557353 13.454±0.00 40.846±0.00 21.472±0.00 2.562±0.00 23.003±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004TH CIL_0004TH_0001 CGP 14:20999255-21070872
CIL_00027R CIL_00027R_0001 CGP 14:21016763-21070872

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111632 Ndrg2-202 protein_coding Mus_musculus 0 1563
ENSMUST00000004673 Ndrg2-201 protein_coding Mus_musculus 0 1437
ENSMUST00000080666 Ndrg4-002 protein_coding Mus_musculus 2.00386e-43 182
ENSMUST00000073139 Ndrg4-001 protein_coding Mus_musculus 2e-33 148
ENSMUST00000166358 Ndrg4-010 nonsense_mediated_decay Mus_musculus 2e-33 148
ENSMUST00000041318 Ndrg4-003 protein_coding Mus_musculus 2e-33 148
ENSMUST00000159851 Ndrg4-006 retained_intron Mus_musculus 6e-33 147
ENSMUST00000159632 Ndrg4-008 retained_intron Mus_musculus 7e-27 126
ENSMUST00000160915 Ndrg4-005 processed_transcript Mus_musculus 7e-27 126
ENSMUST00000162578 Ndrg4-007 processed_transcript Mus_musculus 4e-19 100

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