C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: N-myc downstream regulated gene 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162578 Ndrg4-007 ENSMUSG00000036564 10090 + 8:95709907-95713918 processed_transcript

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonLiverLungMuscleOvaryENSMUST00000162578
Transcript ID Adrenal Colon Liver Lung Muscle Ovary
ENSMUST00000162578 17.057±4.20 7.077±1.75 0.077±0.04 3.013±0.00 0.356±0.08 7.475±1.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008Z0 CIL_0008Z0_0002 VISTA 8:95126508-95728314
CIL_0004IX CIL_0004IX_0002 CGP 8:95633559-95715119
CIL_0004IY CIL_0004IY_0002 CGP 8:95676980-95719010

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258187 NDRG4-001 protein_coding Homo_sapiens 0 261
ENST00000298684 NDRG2-004 protein_coding Homo_sapiens 4e-19 100
ENST00000298687 NDRG2-008 protein_coding Homo_sapiens 5e-19 100
ENST00000350792 NDRG2-003 protein_coding Homo_sapiens 5e-19 100
ENST00000356752 NDRG4-007 protein_coding Homo_sapiens 0 261
ENST00000360463 NDRG2-002 protein_coding Homo_sapiens 5e-19 100
ENST00000394279 NDRG4-201 protein_coding Homo_sapiens 0 261
ENST00000394282 NDRG4-002 protein_coding Homo_sapiens 0 261
ENST00000397844 NDRG2-001 protein_coding Homo_sapiens 4e-25 121
ENST00000397847 NDRG2-007 protein_coding Homo_sapiens 5e-19 100
ENST00000397851 NDRG2-010 protein_coding Homo_sapiens 5e-19 100
ENST00000397853 NDRG2-005 protein_coding Homo_sapiens 5e-19 100
ENST00000397856 NDRG2-201 protein_coding Homo_sapiens 3e-19 100
ENST00000397858 NDRG2-202 protein_coding Homo_sapiens 5e-19 100
ENST00000403829 NDRG2-016 protein_coding Homo_sapiens 3e-19 100
ENST00000421602 NDRG4-003 retained_intron Homo_sapiens 0 436
ENST00000553503 NDRG2-011 protein_coding Homo_sapiens 5e-19 100
ENST00000553593 NDRG2-069 protein_coding Homo_sapiens 2e-19 100
ENST00000553793 NDRG2-072 retained_intron Homo_sapiens 2e-19 100
ENST00000554104 NDRG2-017 protein_coding Homo_sapiens 5e-19 100
ENST00000554143 NDRG2-009 protein_coding Homo_sapiens 5e-19 100
ENST00000555158 NDRG2-012 protein_coding Homo_sapiens 5e-19 100
ENST00000555650 NDRG2-074 retained_intron Homo_sapiens 4e-19 100
ENST00000556008 NDRG2-034 protein_coding Homo_sapiens 5e-16 90
ENST00000556147 NDRG2-013 protein_coding Homo_sapiens 7e-19 100
ENST00000556716 NDRG2-018 retained_intron Homo_sapiens 0.000000000000005 88
ENST00000557353 NDRG2-014 nonsense_mediated_decay Homo_sapiens 4e-19 100
ENST00000557416 NDRG2-073 retained_intron Homo_sapiens 0.00000000000001 84
ENST00000562999 NDRG4-010 protein_coding Homo_sapiens 0 261
ENST00000563209 NDRG4-014 retained_intron Homo_sapiens 0 267
ENST00000563799 NDRG4-004 protein_coding Homo_sapiens 0 261
ENST00000566192 NDRG4-008 protein_coding Homo_sapiens 0 261
ENST00000566265 NDRG4-013 retained_intron Homo_sapiens 0 261
ENST00000568640 NDRG4-006 protein_coding Homo_sapiens 0 209
ENST00000569026 NDRG4-019 protein_coding Homo_sapiens 1.99965e-42 176
ENST00000569408 NDRG4-018 protein_coding Homo_sapiens 1e-38 163
ENST00000569923 NDRG4-005 protein_coding Homo_sapiens 0 235
ENST00000570248 NDRG4-009 protein_coding Homo_sapiens 0 436

Loading