C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cornichon family AMPA receptor auxiliary protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000557659 CNIH1-006 ENSG00000100528 9606 - 14:54427329-54441376 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartKidneyOvaryPlacentaTestisENST00000557659
Transcript ID Breast Heart Kidney Ovary Placenta Testis
ENST00000557659 4.553±0.00 1.337±0.00 5.869±0.00 12.842±4.07 19.030±0.00 12.263±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KQ CIL_0008KQ_0001 VISTA 14:53920865-54521777
CIL_00090Z CIL_00090Z_0001 VISTA 14:53923660-54524764
CIL_0000HQ CIL_0000HQ_0001 CGP 14:54396849-54441431
CIL_0000HV CIL_0000HV_0001 CGP 14:54423560-54489196

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016020 IEA membrane
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000146629 Cnih1-002 nonsense_mediated_decay Mus_musculus 0 789
ENSMUST00000015903 Cnih1-001 protein_coding Mus_musculus 0 789

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