C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription factor 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000557947 TCF12-027 ENSG00000140262 9606 + 15:56919148-57192239 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008VA CIL_0008VA_0001 VISTA 15:56833046-57433760
CIL_0007TG CIL_0007TG_0001 VISTA 15:56833830-57434754

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034755 Tcf12-006 protein_coding Mus_musculus 0 721
ENSMUST00000183404 Tcf12-001 protein_coding Mus_musculus 0 721
ENSMUST00000183992 Tcf12-003 protein_coding Mus_musculus 0 712
ENSMUST00000184783 Tcf12-019 protein_coding Mus_musculus 0 695
ENSMUST00000185117 Tcf12-018 protein_coding Mus_musculus 0 695
ENSMUST00000184196 Tcf12-002 retained_intron Mus_musculus 0 616
ENSMUST00000184523 Tcf12-005 protein_coding Mus_musculus 0 544
ENSMUST00000184107 Tcf12-015 nonsense_mediated_decay Mus_musculus 0 366
ENSMUST00000183594 Tcf12-020 nonsense_mediated_decay Mus_musculus 0 364
ENSMUST00000183492 Tcf12-008 protein_coding Mus_musculus 0 359
ENSMUST00000184867 Tcf12-007 nonsense_mediated_decay Mus_musculus 0 267
ENSMUST00000184072 Tcf12-021 protein_coding Mus_musculus 0 193
ENSMUST00000183647 Tcf12-016 nonsense_mediated_decay Mus_musculus 5.99756e-43 178
ENSMUST00000184416 Tcf12-017 nonsense_mediated_decay Mus_musculus 5e-19 99

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