C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription factor 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000183594 Tcf12-020 ENSMUSG00000032228 10090 - 9:71885215-72111792 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalOvaryPlacentaENSMUST00000183594
Transcript ID Adrenal Ovary Placenta
ENSMUST00000183594 12.787±0.00 22.425±0.00 22.998±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004OZ CIL_0004OZ_0002 CGP 9:71626509-72111871
CIL_0007TG CIL_0007TG_0002 VISTA 9:71674986-72275900
CIL_0008VA CIL_0008VA_0002 VISTA 9:71675967-72276730
CIL_0004OY CIL_0004OY_0002 CGP 9:71842688-72363777

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0005515 IPI protein binding
GO:0005667 IDA transcription factor complex
GO:0010628 IMP positive regulation of gene expression
GO:0045893 IDA positive regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000267811 TCF12-001 protein_coding Homo_sapiens 0 580
ENST00000333725 TCF12-002 protein_coding Homo_sapiens 0 580
ENST00000438423 TCF12-025 protein_coding Homo_sapiens 0 580
ENST00000557843 TCF12-026 protein_coding Homo_sapiens 0 580
ENST00000557947 TCF12-027 protein_coding Homo_sapiens 0 364
ENST00000558908 TCF12-023 processed_transcript Homo_sapiens 0 387
ENST00000559216 TCF12-013 processed_transcript Homo_sapiens 0 243
ENST00000559609 TCF12-003 protein_coding Homo_sapiens 0 580
ENST00000560190 TCF12-024 processed_transcript Homo_sapiens 0 377
ENST00000560887 TCF12-014 processed_transcript Homo_sapiens 0 411
ENST00000561152 TCF12-028 nonsense_mediated_decay Homo_sapiens 0 470
ENST00000561346 TCF12-016 processed_transcript Homo_sapiens 0 411
ENST00000569880 TCF12-033 retained_intron Homo_sapiens 1.00053e-42 176

Loading