C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histidine decarboxylase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000558679 HDC-003 ENSG00000140287 9606 - 15:50253726-50265965 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonKidneyLiverENST00000558679
Transcript ID Brain Breast Colon Kidney Liver
ENST00000558679 0.119±0.00 0.057±0.00 0.240±0.00 0.136±0.00 0.253±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002E7 CIL_0002E7_0001 CGP 15:50182196-50266026
CIL_0002E6 CIL_0002E6_0001 CGP 15:50241947-50355408

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028838 Hdc-001 protein_coding Mus_musculus 0 824
ENSMUST00000138752 Hdc-002 retained_intron Mus_musculus 0 510
ENSMUST00000148591 Hdc-005 processed_transcript Mus_musculus 0 255

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