C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hyaluronan and proteoglycan link protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000558770 HAPLN3-002 ENSG00000140511 9606 - 15:88877295-88895531 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000558770
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000558770 0.365±0.00 0.341±0.00 2.514±0.00 0.160±0.00 0.062±0.00 0.203±0.00 0.027±0.00 1.558±1.08 0.281±0.00 0.774±0.39 0.254±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00011L CIL_00011L_0001 CGP 15:88803443-88895626
CIL_00011I CIL_00011I_0001 CGP 15:88877288-88913411

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032827 Hapln3-201 protein_coding Mus_musculus 0 545

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