C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | SMAD family member 3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000558894  |
SMAD3-013 |
ENSG00000166949 |
9606 | + |
15:67128103-67187447  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008R9 | CIL_0008R9_0001 | VISTA | 15:66606636-67207796 |
| CIL_000471 | CIL_000471_0002 | CGP | 15:66702228-67195195 |
| CIL_0007L5 | CIL_0007L5_0001 | UCNEbase | 15:66906943-67787880 |
| CIL_00046Z | CIL_00046Z_0002 | CGP | 15:67063763-67255195 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003700 | IEA | sequence-specific DNA binding transcription factor activity |
| GO:0005515 | IEA | protein binding |
| GO:0005622 | IEA | intracellular |
| GO:0005667 | IEA | transcription factor complex |
| GO:0006355 | IEA | regulation of transcription, DNA-templated |
| GO:0007179 | IEA | transforming growth factor beta receptor signaling pathway |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000034973
|
Smad3-001 | protein_coding | Mus_musculus | 0 | 939 |
|
ENSMUST00000154323
|
Smad3-002 | protein_coding | Mus_musculus | 0 | 937 |
|
ENSMUST00000133108
|
Smad3-004 | protein_coding | Mus_musculus | 0 | 577 |
|
ENSMUST00000137713
|
Smad3-005 | protein_coding | Mus_musculus | 0 | 492 |
|
ENSDART00000128579
|
smad2-202 | protein_coding | Danio_rerio | 0 | 444 |
|
ENSDART00000044756
|
smad2-201 | protein_coding | Danio_rerio | 0 | 444 |
|
ENSDART00000147653
|
smad2-002 | protein_coding | Danio_rerio | 0 | 444 |
|
ENSDART00000121892
|
smad2-001 | protein_coding | Danio_rerio | 0 | 444 |
|
ENSMUST00000137065
|
Smad3-003 | processed_transcript | Mus_musculus | 4e-36 | 156 |
|
ENSDART00000143608
|
smad2-004 | protein_coding | Danio_rerio | 3e-27 | 126 |
